U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC114548386 carbohydrate sulfotransferase 15-like [ Perca flavescens (yellow perch) ]

Gene ID: 114548386, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC114548386
Gene description
carbohydrate sulfotransferase 15-like
Locus tag
EPR50_G00212730
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC114548386 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 21 NC_041351.1 (11095804..11116726)

Chromosome 21 - NC_041351.1Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 15 Neighboring gene uncharacterized LOC114548484 Neighboring gene carboxypeptidase X (M14 family), member 2 Neighboring gene G-protein coupled receptor 26-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_041351.1 Chromosome 21 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hexose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
carbohydrate sulfotransferase 15-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041351.1 Reference PFLA_1.0 Primary Assembly

    Range
    11095804..11116726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028568311.1 → XP_028424112.1  carbohydrate sulfotransferase 15-like isoform X1

    UniProtKB/TrEMBL
    A0A484C2E6
    Conserved Domains (1) summary
    cl21551
    Location:183 → 488
    Sulfotransfer_3; Sulfotransferase family

  2. XM_028568313.1 → XP_028424114.1  carbohydrate sulfotransferase 15-like isoform X3

    UniProtKB/TrEMBL
    A0A484C2E6
    Conserved Domains (1) summary
    cl21551
    Location:183 → 476
    Sulfotransfer_3; Sulfotransferase family

  3. XM_028568314.1 → XP_028424115.1  carbohydrate sulfotransferase 15-like isoform X4

    UniProtKB/TrEMBL
    A0A484C2E6
    Conserved Domains (1) summary
    cl21551
    Location:183 → 434
    Sulfotransfer_3; Sulfotransferase family

  4. XM_028568312.1 → XP_028424113.1  carbohydrate sulfotransferase 15-like isoform X2

    UniProtKB/TrEMBL
    A0A484C2E6
    Conserved Domains (1) summary
    cl21551
    Location:179 → 484
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases