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si:dkey-121b10.7 heparan sulfate glucosamine 3-O-sulfotransferase 6-like [ Perca flavescens (yellow perch) ]

Gene ID: 114548350, updated on 15-Mar-2024

Summary

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Gene symbol
si:dkey-121b10.7
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6-like
Locus tag
EPR50_G00216200
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
zebrafish all
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Genomic context

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See si:dkey-121b10.7 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
2
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 21 NC_041351.1 (19047606..19072697)

Chromosome 21 - NC_041351.1Genomic Context describing neighboring genes Neighboring gene methionine-R-sulfoxide reductase B1-A-like Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene meiosis specific with OB-fold Neighboring gene MTOR associated protein, LST8 homolog (S. cerevisiae)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041351.1 Chromosome 21 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041351.1 Reference PFLA_1.0 Primary Assembly

    Range
    19047606..19072697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028568243.1 → XP_028424044.1  heparan sulfate glucosamine 3-O-sulfotransferase 6-like

    UniProtKB/TrEMBL
    A0A484C368
    Conserved Domains (1) summary
    pfam00685
    Location:130 → 366
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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