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LOC114547286 disheveled-associated activator of morphogenesis 1-like [ Perca flavescens (yellow perch) ]

Gene ID: 114547286, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114547286
Gene description
disheveled-associated activator of morphogenesis 1-like
Locus tag
EPR50_G00201550
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
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Genomic context

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See LOC114547286 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
26
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 20 NC_041350.1 (5143314..5169681, complement)

Chromosome 20 - NC_041350.1Genomic Context describing neighboring genes Neighboring gene BTB and CNC homology 1, basic leucine zipper transcription factor 2a Neighboring gene mitogen-activated protein kinase kinase kinase 7-like Neighboring gene G protein-coupled receptor 135 Neighboring gene jnk1/mapk8 associated membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041350.1 Chromosome 20 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
disheveled-associated activator of morphogenesis 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041350.1 Reference PFLA_1.0 Primary Assembly

    Range
    5143314..5169681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028566570.1 → XP_028422371.1  disheveled-associated activator of morphogenesis 1-like

    UniProtKB/TrEMBL
    A0A484C4Q9
    Conserved Domains (4) summary
    pfam02181
    Location:587 → 959
    FH2; Formin Homology 2 Domain
    pfam06371
    Location:45 → 232
    Drf_GBD; Diaphanous GTPase-binding Domain
    pfam04111
    Location:442 → 522
    APG6; Autophagy protein Apg6
    pfam06367
    Location:235 → 439
    Drf_FH3; Diaphanous FH3 Domain

  2. XM_028566569.1 → XP_028422370.1  disheveled-associated activator of morphogenesis 1-like

    UniProtKB/TrEMBL
    A0A484C4Q9
    Conserved Domains (4) summary
    pfam02181
    Location:587 → 959
    FH2; Formin Homology 2 Domain
    pfam06371
    Location:45 → 232
    Drf_GBD; Diaphanous GTPase-binding Domain
    pfam04111
    Location:442 → 522
    APG6; Autophagy protein Apg6
    pfam06367
    Location:235 → 439
    Drf_FH3; Diaphanous FH3 Domain
Nucleotide Protein
Heading Accession and Version

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