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LOC114522187 polypeptide N-acetylgalactosaminyltransferase 2-like [ Dendronephthya gigantea ]

Gene ID: 114522187, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114522187
Gene description
polypeptide N-acetylgalactosaminyltransferase 2-like
See related
EnsemblRapid:LOC114522187
Gene type
protein coding
RefSeq status
MODEL
Organism
Dendronephthya gigantea
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Octocorallia; Malacalcyonacea; Nephtheidae; Dendronephthya
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Genomic context

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See LOC114522187 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current DenGig_1.0 (GCF_004324835.1) Unplaced Scaffold NW_021163032.1 (467725..472754)

NW_021163032.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase-like 1 Neighboring gene zinc transporter ZIP9-B-like Neighboring gene haloacid dehalogenase-like hydrolase domain-containing protein 3 Neighboring gene sprT-like domain-containing protein Spartan

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021163032 Unplaced Scaffold Reference DenGig_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dendronephthya gigantea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DenGig_1.0 Primary Assembly

Genomic

  1. NW_021163032.1 Reference DenGig_1.0 Primary Assembly

    Range
    467725..472754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028542820.1 → XP_028398621.1  polypeptide N-acetylgalactosaminyltransferase 2-like isoform X3

    Related
    XP_028398621.1, XM_028542820.1
    Conserved Domains (2) summary
    cd02510
    Location:62 → 381
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:395 → 508
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_028542818.1 → XP_028398619.1  polypeptide N-acetylgalactosaminyltransferase 2-like isoform X1

    Related
    XP_028398619.1, XM_028542818.1
    Conserved Domains (2) summary
    cd02510
    Location:107 → 426
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:440 → 553
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_028542819.1 → XP_028398620.1  polypeptide N-acetylgalactosaminyltransferase 2-like isoform X2

    Related
    XP_028398620.1, XM_028542819.1
    Conserved Domains (2) summary
    cd02510
    Location:107 → 402
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:416 → 529
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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