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CHST11 carbohydrate sulfotransferase 11 [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114513082, updated on 30-Mar-2024

Summary

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Gene symbol
CHST11
Gene description
carbohydrate sulfotransferase 11
See related
EnsemblRapid:ENSPDIG00005011309
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See CHST11 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 2 NC_040904.2 (203393149..203637222)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 2 Unlocalized Scaffold NW_021126247.1 (58154985..58394427)

Chromosome 2 - NC_040904.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118499171 Neighboring gene thioredoxin reductase 1 Neighboring gene EP300 interacting inhibitor of differentiation 3 Neighboring gene uncharacterized LOC118499173 Neighboring gene solute carrier family 41 member 2 Neighboring gene U6 spliceosomal RNA Neighboring gene NOP protein chaperone 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040904.2 Reference mPhyDis1.pri.v3

    Range
    203393149..203637222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028532199.2 → XP_028388000.1  carbohydrate sulfotransferase 11 isoform X1

    UniProtKB/TrEMBL
    A0A6J2NDF9, A0A834AVM9
    Conserved Domains (1) summary
    pfam03567
    Location:113 → 343
    Sulfotransfer_2; Sulfotransferase family

  2. XM_028532200.2 → XP_028388001.1  carbohydrate sulfotransferase 11 isoform X2

    UniProtKB/TrEMBL
    A0A6J2N7X3, A0A834AVM9
    Related
    ENSPDIP00005016104.2, ENSPDIT00005018639.2
    Conserved Domains (1) summary
    pfam03567
    Location:108 → 338
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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