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CLEC5A C-type lectin domain containing 5A [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114508192, updated on 30-Mar-2024

Summary

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Gene symbol
CLEC5A
Gene description
C-type lectin domain containing 5A
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See CLEC5A in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 10 NC_040912.2 (85321379..85332442, complement)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 11 NC_040913.1 (84338345..84347353, complement)

Chromosome 10 - NC_040912.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114507264 Neighboring gene olfactory receptor 9A4 Neighboring gene uncharacterized LOC118497204 Neighboring gene taste 2 receptor member 38 Neighboring gene maltase-glucoamylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables virus receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 5 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040912.2 Reference mPhyDis1.pri.v3

    Range
    85321379..85332442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036010972.1 → XP_035866865.1  C-type lectin domain family 5 member A isoform X2

    UniProtKB/TrEMBL
    A0A7E6CIU1, A0A833Z2X9
    Conserved Domains (1) summary
    cd03593
    Location:77 → 191
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_036010971.1 → XP_035866864.1  C-type lectin domain family 5 member A isoform X1

    UniProtKB/TrEMBL
    A0A7E6CKZ3
    Conserved Domains (1) summary
    cd03593
    Location:77 → 155
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

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