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ATRN attractin [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114506301, updated on 30-Mar-2024

Summary

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Gene symbol
ATRN
Gene description
attractin
See related
EnsemblRapid:ENSPDIG00005016808
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See ATRN in Genome Data Viewer
Location:
chromosome: 9
Exon count:
29
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 9 NC_040911.2 (81142196..81307270, complement)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 10 NC_040912.1 (81142196..81307277, complement)

Chromosome 9 - NC_040911.2Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 33 Neighboring gene GDNF family receptor alpha 4 Neighboring gene 60S ribosomal protein L31-like Neighboring gene dynein axonemal assembly factor 9 Neighboring gene small nucleolar RNA SNORA8 Neighboring gene solute carrier family 4 member 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
attractin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040911.2 Reference mPhyDis1.pri.v3

    Range
    81142196..81307270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028523925.2 → XP_028379726.1  attractin

    UniProtKB/TrEMBL
    A0A6J2MK31, A0A834DKZ6
    Related
    ENSPDIP00005023712.1, ENSPDIT00005027449.2
    Conserved Domains (7) summary
    smart00423
    Location:634 → 680
    PSI; domain found in Plexins, Semaphorins and Integrins
    PHA03098
    Location:334 → 597
    PHA03098; kelch-like protein; Provisional
    cd00041
    Location:120 → 235
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00055
    Location:1049 → 1094
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    sd00038
    Location:489 → 538
    Kelch; KELCH repeat [structural motif]
    pfam01437
    Location:919 → 970
    PSI; Plexin repeat
    cl02432
    Location:775 → 907
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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