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CLDN2 claudin 2 [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114505167, updated on 30-Mar-2024

Summary

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Gene symbol
CLDN2
Gene description
claudin 2
See related
EnsemblRapid:ENSPDIG00005005428
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See CLDN2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) X NC_050198.1 (56357739..56370324, complement)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 9 NC_040911.1 (50970489..50971348)

Chromosome X - NC_050198.1Genomic Context describing neighboring genes Neighboring gene UPF0600 protein C5orf51-like Neighboring gene MORC family CW-type zinc finger 4 Neighboring gene TBC1 domain family member 8B Neighboring gene ring finger protein 128

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_050198.1 Reference mPhyDis1.pri.v3

    Range
    56357739..56370324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036016506.1 → XP_035872399.1  claudin-2

    UniProtKB/TrEMBL
    A0A7E6D201
    Related
    ENSPDIP00005007692.1, ENSPDIT00005008951.2
    Conserved Domains (1) summary
    cl21598
    Location:23 → 181
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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