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OCLN occludin [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114504333, updated on 30-Mar-2024

Summary

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Gene symbol
OCLN
Gene description
occludin
See related
EnsemblRapid:ENSPDIG00005000787
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See OCLN in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 3 NC_040905.2 (42792363..42842715)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 1 NC_040903.1 (42817966..42867891)

Chromosome 3 - NC_040905.2Genomic Context describing neighboring genes Neighboring gene adenylate kinase 6 Neighboring gene RAD17 checkpoint clamp loader component Neighboring gene uncharacterized LOC118499458 Neighboring gene MARVEL domain containing 2 Neighboring gene U6 spliceosomal RNA Neighboring gene general transcription factor IIH subunit 2 Neighboring gene NLR family apoptosis inhibitory protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
occludin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040905.2 Reference mPhyDis1.pri.v3

    Range
    42792363..42842715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036020376.1 → XP_035876269.1  occludin

    UniProtKB/TrEMBL
    A0A6J2MCZ7
    Conserved Domains (2) summary
    pfam01284
    Location:57 → 262
    MARVEL; Membrane-associating domain
    pfam07303
    Location:419 → 518
    Occludin_ELL; Occludin homology domain

  2. XM_028522156.2 → XP_028377957.1  occludin

    UniProtKB/TrEMBL
    A0A6J2MCZ7
    Related
    ENSPDIP00005000977.1, ENSPDIT00005001195.2
    Conserved Domains (2) summary
    pfam01284
    Location:57 → 262
    MARVEL; Membrane-associating domain
    pfam07303
    Location:419 → 518
    Occludin_ELL; Occludin homology domain

  3. XM_036020377.1 → XP_035876270.1  occludin

    UniProtKB/TrEMBL
    A0A6J2MCZ7
    Conserved Domains (2) summary
    pfam01284
    Location:57 → 262
    MARVEL; Membrane-associating domain
    pfam07303
    Location:419 → 518
    Occludin_ELL; Occludin homology domain
Nucleotide Protein
Heading Accession and Version

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