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BAZ1B bromodomain adjacent to zinc finger domain 1B [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114497896, updated on 30-Mar-2024

Summary

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Gene symbol
BAZ1B
Gene description
bromodomain adjacent to zinc finger domain 1B
See related
EnsemblRapid:ENSPDIG00005007736
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See BAZ1B in Genome Data Viewer
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 3 NC_040905.2 (92690792..92768597, complement)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 1 NC_040903.1 (92716865..92793825, complement)

Chromosome 3 - NC_040905.2Genomic Context describing neighboring genes Neighboring gene FKBP prolyl isomerase family member 6 (inactive) Neighboring gene frizzled class receptor 9 Neighboring gene uncharacterized LOC118499538 Neighboring gene uncharacterized LOC118499539 Neighboring gene small nucleolar RNA SNORA66 Neighboring gene uncharacterized LOC118499537 Neighboring gene small nucleolar RNA SNORA25 Neighboring gene BAF chromatin remodeling complex subunit BCL7B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H2AXY142 kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WICH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein kinase BAZ1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040905.2 Reference mPhyDis1.pri.v3

    Range
    92690792..92768597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028513880.2 → XP_028369681.1  tyrosine-protein kinase BAZ1B

    UniProtKB/TrEMBL
    A0A6J2LQR1, A0A834B2P9
    Related
    ENSPDIP00005010999.1, ENSPDIT00005012738.2
    Conserved Domains (7) summary
    cd05505
    Location:1345 → 1441
    Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
    smart00571
    Location:604 → 668
    DDT; domain in different transcription and chromosome remodeling factors
    cd15628
    Location:1186 → 1231
    PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
    pfam15613
    Location:898 → 1025
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    pfam10537
    Location:21 → 120
    WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
    pfam15612
    Location:727 → 767
    WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    pfam17380
    Location:407 → 862
    DUF5401; Family of unknown function (DUF5401)
Nucleotide Protein
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