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B3GALT6 beta-1,3-galactosyltransferase 6 [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114497174, updated on 30-Mar-2024

Summary

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Gene symbol
B3GALT6
Gene description
beta-1,3-galactosyltransferase 6
See related
EnsemblRapid:ENSPDIG00005003462
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See B3GALT6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 5 NC_040907.2 (294098..310930)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 5 NC_040907.1 (38223064..38224179)

Chromosome 5 - NC_040907.2Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 4 Neighboring gene stromal cell derived factor 4 Neighboring gene C1q and TNF related 12 Neighboring gene ubiquitin conjugating enzyme E2 J2 Neighboring gene sodium channel epithelial 1 subunit delta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040907.2 Reference mPhyDis1.pri.v3

    Range
    294098..310930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028512776.2 → XP_028368577.1  beta-1,3-galactosyltransferase 6

    UniProtKB/TrEMBL
    A0A6J2LLD1
    Related
    ENSPDIP00005004900.1, ENSPDIT00005005761.2
    Conserved Domains (1) summary
    cl21608
    Location:71 → 262
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_004903043.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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