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RBBP4 RB binding protein 4, chromatin remodeling factor [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114496344, updated on 30-Mar-2024

Summary

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Gene symbol
RBBP4
Gene description
RB binding protein 4, chromatin remodeling factor
See related
EnsemblRapid:ENSPDIG00005015939
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See RBBP4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 5 NC_040907.2 (20900432..20923057)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 5 NC_040907.1 (58829307..58851930)

Chromosome 5 - NC_040907.2Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 8A Neighboring gene zinc finger and BTB domain containing 8 opposite strand Neighboring gene syncoilin, intermediate filament protein Neighboring gene NHS like 3 Neighboring gene tyrosyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESC/E(Z) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NuRD complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-binding protein RBBP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040907.2 Reference mPhyDis1.pri.v3

    Range
    20900432..20923057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028511660.2 → XP_028367461.1  histone-binding protein RBBP4

    UniProtKB/TrEMBL
    A0A6J2LJE6, A0A834AHC4
    Related
    ENSPDIP00005022532.1, ENSPDIT00005026059.2
    Conserved Domains (3) summary
    sd00039
    Location:128 → 175
    7WD40; WD40 repeat [structural motif]
    pfam12265
    Location:19 → 88
    CAF1C_H4-bd; Histone-binding protein RBBP4 or subunit C of CAF1 complex
    cl29593
    Location:122 → 403
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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