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CHPF chondroitin polymerizing factor [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114494176, updated on 30-Mar-2024

Summary

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Gene symbol
CHPF
Gene description
chondroitin polymerizing factor
See related
EnsemblRapid:ENSPDIG00005011791
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See CHPF in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 4 NC_040906.2 (14168968..14173861)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 4 NC_040906.1 (14169148..14173861)

Chromosome 4 - NC_040906.2Genomic Context describing neighboring genes Neighboring gene obscurin like cytoskeletal adaptor 1 Neighboring gene transmembrane protein 198 Neighboring gene acid sensing ion channel subunit family member 4 Neighboring gene GDP-mannose pyrophosphorylase A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040906.2 Reference mPhyDis1.pri.v3

    Range
    14168968..14173861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028509074.2 → XP_028364875.1  chondroitin sulfate synthase 2

    UniProtKB/TrEMBL
    A0A6J2LGN5, A0A834AKI9
    Related
    ENSPDIP00005016734.1, ENSPDIT00005019376.1
    Conserved Domains (2) summary
    pfam05679
    Location:262 → 762
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:194 → 283
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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