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LOC114489529 histone H2A type 1 [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114489529, updated on 30-Mar-2024

Summary

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Gene symbol
LOC114489529
Gene description
histone H2A type 1
See related
EnsemblRapid:ENSPDIG00005026610
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
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Genomic context

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See LOC114489529 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 14 NC_040916.2 (27826079..27826518, complement)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) Unplaced Scaffold NW_021126283.1 (1163873..1164269, complement)

Chromosome 14 - NC_040916.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene histone H3.1 Neighboring gene histone H2B type 1-K-like Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene transfer RNA arginine (anticodon ACG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2A type 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040916.2 Reference mPhyDis1.pri.v3

    Range
    27826079..27826518 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028503500.2 → XP_028359301.1  histone H2A type 1

    UniProtKB/TrEMBL
    A0A6J2KWT5
    Related
    ENSPDIP00005036140.1, ENSPDIT00005043099.1
    Conserved Domains (1) summary
    PTZ00017
    Location:1 → 130
    PTZ00017; histone H2A; Provisional
Nucleotide Protein
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