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LOC114423352 callose synthase 7-like [ Glycine soja ]

Gene ID: 114423352, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114423352
Gene description
callose synthase 7-like
Locus tag
D0Y65_022183
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114423352 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
42
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 8 NC_041009.1 (43040341..43064940)

Chromosome 8 - NC_041009.1Genomic Context describing neighboring genes Neighboring gene GDSL esterase/lipase At4g10955-like Neighboring gene probable sucrose-phosphate synthase 3 Neighboring gene uncharacterized LOC114423354 Neighboring gene probable receptor-like protein kinase At2g42960

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041009.1 Chromosome 8 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 7-like
Names
Callose synthase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041009.1 Reference ASM419377v2 Primary Assembly

    Range
    43040341..43064940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028390081.1 → XP_028245882.1  callose synthase 7-like

    UniProtKB/TrEMBL
    A0A445FRR6, A0A445JME9
    Conserved Domains (3) summary
    pfam02364
    Location:1044 → 1778
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:58 → 177
    Vta1; Vta1 like
    pfam14288
    Location:334 → 446
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  2. XM_028390082.1 → XP_028245883.1  callose synthase 7-like

    UniProtKB/TrEMBL
    A0A445FRR6, A0A445JME9
    Conserved Domains (3) summary
    pfam02364
    Location:1044 → 1778
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:58 → 177
    Vta1; Vta1 like
    pfam14288
    Location:334 → 446
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
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