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LOC114423175 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 [ Glycine soja ]

Gene ID: 114423175, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114423175
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10
Locus tag
D0Y65_021984
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114423175 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 8 NC_041009.1 (40401050..40406438)

Chromosome 8 - NC_041009.1Genomic Context describing neighboring genes Neighboring gene potassium transporter 6-like Neighboring gene uncharacterized LOC114422863 Neighboring gene GPN-loop GTPase 3 Neighboring gene uncharacterized LOC114423181

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041009.1 Chromosome 8 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10
Names
putative alpha,alpha-trehalose-phosphate synthase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041009.1 Reference ASM419377v2 Primary Assembly

    Range
    40401050..40406438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028389815.1 → XP_028245616.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

    UniProtKB/TrEMBL
    A0A0B2PMD5, A0A445JLP9
    Conserved Domains (1) summary
    PLN02205
    Location:1 → 844
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]

  2. XM_028389816.1 → XP_028245617.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

    UniProtKB/TrEMBL
    A0A0B2PMD5, A0A445JLP9
    Conserved Domains (1) summary
    PLN02205
    Location:1 → 844
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Nucleotide Protein
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