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LOC114422744 probable UDP-arabinopyranose mutase 1 [ Glycine soja ]

Gene ID: 114422744, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114422744
Gene description
probable UDP-arabinopyranose mutase 1
Locus tag
D0Y65_021551
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114422744 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 8 NC_041009.1 (21901804..21904132, complement)

Chromosome 8 - NC_041009.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114424025 Neighboring gene probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 Neighboring gene cytochrome P450 85A-like Neighboring gene uncharacterized LOC114424352

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041009.1 Chromosome 8 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-arabinopyranose mutase 1
Names
putative UDP-arabinopyranose mutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041009.1 Reference ASM419377v2 Primary Assembly

    Range
    21901804..21904132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028389248.1 → XP_028245049.1  probable UDP-arabinopyranose mutase 1

    UniProtKB/TrEMBL
    A0A0B2REP4
    Conserved Domains (1) summary
    PLN03180
    Location:1 → 344
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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