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LOC114419694 glycoprotein 3-alpha-L-fucosyltransferase A-like [ Glycine soja ]

Gene ID: 114419694, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114419694
Gene description
glycoprotein 3-alpha-L-fucosyltransferase A-like
Locus tag
D0Y65_018561
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114419694 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 7 NC_041008.1 (40630212..40637323, complement)

Chromosome 7 - NC_041008.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114417818 Neighboring gene ferredoxin--nitrite reductase, chloroplastic-like Neighboring gene uncharacterized LOC114419695 Neighboring gene uncharacterized LOC114419696 Neighboring gene ABSCISIC ACID-INSENSITIVE 5-like protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041008.1 Chromosome 7 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein 3-alpha-L-fucosyltransferase A-like
Names
Glycoprotein 3-alpha-L-fucosyltransferase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041008.1 Reference ASM419377v2 Primary Assembly

    Range
    40630212..40637323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028385439.1 → XP_028241240.1  glycoprotein 3-alpha-L-fucosyltransferase A-like

    UniProtKB/TrEMBL
    A0A0B2S036, A0A445JZQ0
    Conserved Domains (1) summary
    pfam00852
    Location:227 → 391
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
Nucleotide Protein
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