U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC114416500 hydroxyproline O-galactosyltransferase GALT6-like [ Glycine soja ]

Gene ID: 114416500, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC114416500
Gene description
hydroxyproline O-galactosyltransferase GALT6-like
Locus tag
D0Y65_015114
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC114416500 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 6 NC_041007.1 (16467652..16471517)

Chromosome 6 - NC_041007.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114416499 Neighboring gene transcription factor MYB35-like Neighboring gene DDT domain-containing protein DDR4-like Neighboring gene mediator of RNA polymerase II transcription subunit 4-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_041007.1 Chromosome 6 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hydroxyproline O-galactosyltransferase GALT6-like
Names
Hydroxyproline O-galactosyltransferase GALT6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041007.1 Reference ASM419377v2 Primary Assembly

    Range
    16467652..16471517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028381384.1 → XP_028237185.1  hydroxyproline O-galactosyltransferase GALT6-like

    UniProtKB/TrEMBL
    A0A445KBQ2, A0A445KBQ8
    Conserved Domains (1) summary
    PLN03133
    Location:169 → 653
    PLN03133; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases