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LOC114412276 probable UDP-arabinopyranose mutase 1 [ Glycine soja ]

Gene ID: 114412276, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114412276
Gene description
probable UDP-arabinopyranose mutase 1
Locus tag
D0Y65_000635
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114412276 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 1 NC_041002.1 (9020219..9023513)

Chromosome 1 - NC_041002.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene multifunctional methyltransferase subunit TRM112 homolog B-like Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene salicylate carboxymethyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041002.1 Chromosome 1 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-arabinopyranose mutase 1
Names
putative UDP-arabinopyranose mutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041002.1 Reference ASM419377v2 Primary Assembly

    Range
    9020219..9023513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028376106.1 → XP_028231907.1  probable UDP-arabinopyranose mutase 1

    UniProtKB/TrEMBL
    A0A0B2P8D5
    Conserved Domains (1) summary
    PLN03180
    Location:7 → 349
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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