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LOC114398431 uncharacterized LOC114398431 [ Glycine soja ]

Gene ID: 114398431, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114398431
Gene description
uncharacterized LOC114398431
Locus tag
D0Y65_050039
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114398431 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 19 NC_041020.1 (213194..215394, complement)

Chromosome 19 - NC_041020.1Genomic Context describing neighboring genes Neighboring gene SUPPRESSOR OF GAMMA RESPONSE 1-like Neighboring gene CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like Neighboring gene golgin candidate 6-like Neighboring gene putative glucose-6-phosphate 1-epimerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041020.1 Chromosome 19 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC114398431
Names
Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041020.1 Reference ASM419377v2 Primary Assembly

    Range
    213194..215394 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028360626.1 → XP_028216427.1  uncharacterized protein LOC114398431 isoform X2

    Conserved Domains (1) summary
    pfam04724
    Location:36 → 383
    Glyco_transf_17; Glycosyltransferase family 17

  2. XM_028360625.1 → XP_028216426.1  uncharacterized protein LOC114398431 isoform X1

    UniProtKB/TrEMBL
    A0A0B2QIF5
    Conserved Domains (1) summary
    pfam04724
    Location:37 → 384
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
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