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LOC114383015 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 [ Glycine soja ]

Gene ID: 114383015, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114383015
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
Locus tag
D0Y65_038832
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114383015 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 14 NC_041015.1 (35603897..35607860, complement)

Chromosome 14 - NC_041015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Mb2253c-like Neighboring gene uncharacterized protein Mb2253c-like Neighboring gene uncharacterized LOC114384032 Neighboring gene protein LAZ1 homolog 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041015.1 Chromosome 14 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041015.1 Reference ASM419377v2 Primary Assembly

    Range
    35603897..35607860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028342587.1 → XP_028198388.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A0B2P9A6
    Conserved Domains (1) summary
    cd02537
    Location:311 → 556
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_028342588.1 → XP_028198389.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X2

    Conserved Domains (1) summary
    cd02537
    Location:298 → 543
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

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