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LOC114380290 arabinosyltransferase RRA2-like [ Glycine soja ]

Gene ID: 114380290, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114380290
Gene description
arabinosyltransferase RRA2-like
Locus tag
D0Y65_033357
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114380290 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 12 NC_041013.1 (3306130..3308961)

Chromosome 12 - NC_041013.1Genomic Context describing neighboring genes Neighboring gene polyol transporter 5-like Neighboring gene HVA22-like protein k Neighboring gene rho GTPase-activating protein gacHH-like Neighboring gene probable NAD(P)H dehydrogenase (quinone) FQR1-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041013.1 Chromosome 12 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in root hair cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase RRA2-like
Names
Arabinosyltransferase RRA3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041013.1 Reference ASM419377v2 Primary Assembly

    Range
    3306130..3308961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028339288.1 → XP_028195089.1  arabinosyltransferase RRA2-like

    UniProtKB/TrEMBL
    A0A445HKG0
    Conserved Domains (1) summary
    pfam03407
    Location:192 → 414
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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