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LOC114376265 hydroxyproline O-galactosyltransferase HPGT1-like [ Glycine soja ]

Gene ID: 114376265, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114376265
Gene description
hydroxyproline O-galactosyltransferase HPGT1-like
Locus tag
D0Y65_028718
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114376265 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 11 NC_041012.1 (1378520..1383475, complement)

Chromosome 11 - NC_041012.1Genomic Context describing neighboring genes Neighboring gene probable inactive receptor kinase At4g23740 Neighboring gene putative glucose-6-phosphate 1-epimerase Neighboring gene BTB/POZ domain-containing protein POB1-like Neighboring gene 40S ribosomal protein S2-4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041012.1 Chromosome 11 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase HPGT1-like
Names
Hydroxyproline O-galactosyltransferase HPGT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041012.1 Reference ASM419377v2 Primary Assembly

    Range
    1378520..1383475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028334289.1 → XP_028190090.1  hydroxyproline O-galactosyltransferase HPGT1-like

    UniProtKB/TrEMBL
    A0A445HVQ1, A0A445HVU3
    Conserved Domains (1) summary
    PLN03193
    Location:2 → 342
    PLN03193; beta-1,3-galactosyltransferase; Provisional

RNA

  1. XR_003658930.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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