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LOC114371126 probable beta-1,4-xylosyltransferase IRX9 [ Glycine soja ]

Gene ID: 114371126, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114371126
Gene description
probable beta-1,4-xylosyltransferase IRX9
Locus tag
D0Y65_026047
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine soja
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC114371126 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM419377v2 (GCF_004193775.1) 10 NC_041011.1 (4634384..4636926, complement)

Chromosome 10 - NC_041011.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-3-like Neighboring gene protein IQ-DOMAIN 1-like Neighboring gene importin subunit alpha-9-like Neighboring gene lipid phosphate phosphatase gamma-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041011.1 Chromosome 10 Reference ASM419377v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucuronoxylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type secondary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,4-xylosyltransferase IRX9
Names
putative beta-1,4-xylosyltransferase IRX9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM419377v2 Primary Assembly

Genomic

  1. NC_041011.1 Reference ASM419377v2 Primary Assembly

    Range
    4634384..4636926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028328554.1 → XP_028184355.1  probable beta-1,4-xylosyltransferase IRX9

    UniProtKB/TrEMBL
    A0A445IIB2
    Conserved Domains (1) summary
    cl11394
    Location:1 → 333
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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