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LOC114310628 UDP-arabinopyranose mutase 1-like [ Camellia sinensis ]

Gene ID: 114310628, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114310628
Gene description
UDP-arabinopyranose mutase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114310628 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021024493.1 (1317836..1323677, complement)

NW_021024493.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114318056 Neighboring gene SUMO-activating enzyme subunit 1B-1-like Neighboring gene disease resistance protein At4g27190-like Neighboring gene uncharacterized LOC114318306

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021024493 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021024493.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    1317836..1323677 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028256703.1 → XP_028112504.1  UDP-arabinopyranose mutase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A7J7HWS3
    Conserved Domains (1) summary
    PLN03180
    Location:1 → 345
    PLN03180; reversibly glycosylated polypeptide; Provisional

  2. XM_028256771.1 → XP_028112572.1  UDP-arabinopyranose mutase 1-like isoform X2

    UniProtKB/TrEMBL
    A0A4S4DHC9, A0A7J7HWS3
    Conserved Domains (1) summary
    PLN03180
    Location:1 → 342
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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