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LOC114308231 probable galacturonosyltransferase 13 [ Camellia sinensis ]

Gene ID: 114308231, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114308231
Gene description
probable galacturonosyltransferase 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114308231 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021024515.1 (4254172..4261368, complement)

NW_021024515.1Genomic Context describing neighboring genes Neighboring gene chaperone protein ClpB3, chloroplastic-like Neighboring gene membrane-anchored ubiquitin-fold protein 1-like Neighboring gene protein NRT1/ PTR FAMILY 5.5-like Neighboring gene BAG family molecular chaperone regulator 8, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021024515 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 13; probable galacturonosyltransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021024515.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    4254172..4261368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028253786.1 → XP_028109587.1  probable galacturonosyltransferase 14 isoform X2

    UniProtKB/TrEMBL
    A0A7J7I2E6
    Conserved Domains (1) summary
    PLN02870
    Location:1 → 532
    PLN02870; Probable galacturonosyltransferase

  2. XM_028253781.1 → XP_028109582.1  probable galacturonosyltransferase 13 isoform X1

    UniProtKB/TrEMBL
    A0A7J7I2E6
    Conserved Domains (1) summary
    PLN02870
    Location:1 → 533
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
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