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LOC114291830 probable galacturonosyltransferase 11 [ Camellia sinensis ]

Gene ID: 114291830, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114291830
Gene description
probable galacturonosyltransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114291830 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021027515.1 (868871..878127, complement)

NW_021027515.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114291837 Neighboring gene DNA polymerase eta-like Neighboring gene uncharacterized LOC114291840

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021027515 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021027515.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    868871..878127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028235704.1 → XP_028091505.1  probable galacturonosyltransferase 11 isoform X1

    UniProtKB/TrEMBL
    A0A7J7G215
    Conserved Domains (1) summary
    PLN02742
    Location:1 → 536
    PLN02742; Probable galacturonosyltransferase

  2. XM_028235707.1 → XP_028091508.1  probable galacturonosyltransferase 11 isoform X3

    UniProtKB/TrEMBL
    A0A7J7G215
    Conserved Domains (1) summary
    PLN02742
    Location:1 → 451
    PLN02742; Probable galacturonosyltransferase

  3. XM_028235705.1 → XP_028091506.1  probable galacturonosyltransferase 11 isoform X2

    UniProtKB/TrEMBL
    A0A4S4DMY9, A0A7J7G215
    Conserved Domains (1) summary
    PLN02742
    Location:6 → 490
    PLN02742; Probable galacturonosyltransferase
Nucleotide Protein
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