U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC114289742 sucrose synthase 2 [ Camellia sinensis ]

Gene ID: 114289742, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC114289742
Gene description
sucrose synthase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC114289742 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021027365.1 (792960..800130, complement)

NW_021027365.1Genomic Context describing neighboring genes Neighboring gene condensin-2 complex subunit H2 Neighboring gene pectinesterase-like Neighboring gene uncharacterized LOC114289726 Neighboring gene uncharacterized LOC114289715

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_021027365 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptome and metabolite analysis identifies nitrogen utilization genes in tea plant (Camellia sinensis). Li W, et al. Sci Rep, 2017 May 10. PMID 28490757, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sucrose synthase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021027365.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    792960..800130 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028233510.1 → XP_028089311.1  sucrose synthase 2

    UniProtKB/TrEMBL
    A0A4S4DPL9
    Conserved Domains (1) summary
    PLN00142
    Location:10 → 810
    PLN00142; sucrose synthase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases