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LOC114288955 O-fucosyltransferase 36-like [ Camellia sinensis ]

Gene ID: 114288955, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114288955
Gene description
O-fucosyltransferase 36-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC114288955 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021027290.1 (997900..1004551, complement)

NW_021027290.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome regulatory subunit 7 Neighboring gene uncharacterized LOC114288954 Neighboring gene uncharacterized LOC114288956 Neighboring gene RING-H2 finger protein ATL60-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021027290 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome and metabolite analysis identifies nitrogen utilization genes in tea plant (Camellia sinensis). Li W, et al. Sci Rep, 2017 May 10. PMID 28490757, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-fucosyltransferase 36-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021027290.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    997900..1004551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028232582.1 → XP_028088383.1  O-fucosyltransferase 36-like

    Conserved Domains (1) summary
    cd11296
    Location:382 → 541
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
Heading Accession and Version

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