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LOC114285841 beta-1,3-galactosyltransferase 7-like [ Camellia sinensis ]

Gene ID: 114285841, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114285841
Gene description
beta-1,3-galactosyltransferase 7-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114285841 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021027046.1 (358853..369375, complement)

NW_021027046.1Genomic Context describing neighboring genes Neighboring gene protein SRG1 Neighboring gene uncharacterized LOC114285824 Neighboring gene uracil phosphoribosyltransferase-like Neighboring gene E3 ubiquitin ligase BIG BROTHER-related-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021027046 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021027046.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    358853..369375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028228917.1 → XP_028084718.1  beta-1,3-galactosyltransferase 7-like isoform X1

    UniProtKB/TrEMBL
    A0A7J7I793
    Conserved Domains (1) summary
    PLN03193
    Location:45 → 430
    PLN03193; beta-1,3-galactosyltransferase; Provisional

  2. XM_028228919.1 → XP_028084720.1  beta-1,3-galactosyltransferase 7-like isoform X3

    UniProtKB/TrEMBL
    A0A7J7I793
    Conserved Domains (1) summary
    PLN03193
    Location:9 → 394
    PLN03193; beta-1,3-galactosyltransferase; Provisional

  3. XM_028228918.1 → XP_028084719.1  beta-1,3-galactosyltransferase 7-like isoform X2

    UniProtKB/TrEMBL
    A0A4S4DVK4, A0A7J7I793
    Conserved Domains (1) summary
    PLN03193
    Location:24 → 409
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
Heading Accession and Version

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