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LOC114281013 GPI mannosyltransferase 1-like [ Camellia sinensis ]

Gene ID: 114281013, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114281013
Gene description
GPI mannosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114281013 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021026673.1 (313647..318214)

NW_021026673.1Genomic Context describing neighboring genes Neighboring gene DNA mismatch repair protein MSH5-like Neighboring gene protein NLP6-like Neighboring gene cilia- and flagella-associated protein 251-like Neighboring gene ubiquitin-conjugating enzyme E2-23 kDa-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021026673 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: GPI mannosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021026673.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    313647..318214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028223435.1 → XP_028079236.1  LOW QUALITY PROTEIN: GPI mannosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A4S4E3E0
    Conserved Domains (1) summary
    PLN02841
    Location:4 → 438
    PLN02841; GPI mannosyltransferase
Nucleotide Protein
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