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LOC114279088 cellulose synthase A catalytic subunit 3 [UDP-forming] [ Camellia sinensis ]

Gene ID: 114279088, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114279088
Gene description
cellulose synthase A catalytic subunit 3 [UDP-forming]
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114279088 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021026546.1 (734412..749729, complement)

NW_021026546.1Genomic Context describing neighboring genes Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene receptor-like protein 4 Neighboring gene uncharacterized LOC114279072 Neighboring gene cellulose synthase A catalytic subunit 3 [UDP-forming]-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021026546 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 3 [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021026546.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    734412..749729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028221269.1 → XP_028077070.1  cellulose synthase A catalytic subunit 3 [UDP-forming] isoform X1

    UniProtKB/TrEMBL
    A0A7J7HI99
    Conserved Domains (1) summary
    PLN02638
    Location:1 → 1083
    PLN02638; cellulose synthase A (UDP-forming), catalytic subunit

  2. XM_028221270.1 → XP_028077071.1  cellulose synthase A catalytic subunit 3 [UDP-forming] isoform X2

    UniProtKB/TrEMBL
    A0A7J7HI99
    Conserved Domains (1) summary
    PLN02638
    Location:1 → 1067
    PLN02638; cellulose synthase A (UDP-forming), catalytic subunit

  3. XM_028221268.1 → XP_028077069.1  cellulose synthase A catalytic subunit 3 [UDP-forming] isoform X1

    UniProtKB/TrEMBL
    A0A7J7HI99
    Conserved Domains (1) summary
    PLN02638
    Location:1 → 1083
    PLN02638; cellulose synthase A (UDP-forming), catalytic subunit
Nucleotide Protein
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