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LOC114276381 probable galacturonosyltransferase 9 [ Camellia sinensis ]

Gene ID: 114276381, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114276381
Gene description
probable galacturonosyltransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114276381 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021026348.1 (507807..510916, complement)

NW_021026348.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R12 Neighboring gene small nucleolar RNA SNORD24 Neighboring gene basic leucine zipper 43-like Neighboring gene E3 ubiquitin-protein ligase Praja-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021026348 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Effect of fluoride treatment on gene expression in tea plant (Camellia sinensis). Li QS, et al. Sci Rep, 2017 Aug 29. PMID 28851890, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021026348.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    507807..510916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028218180.1 → XP_028073981.1  probable galacturonosyltransferase 9

    UniProtKB/TrEMBL
    A0A4S4E943
    Conserved Domains (1) summary
    PLN02523
    Location:13 → 553
    PLN02523; galacturonosyltransferase
Nucleotide Protein
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