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LOC114273156 hydroxyproline O-arabinosyltransferase 1-like [ Camellia sinensis ]

Gene ID: 114273156, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114273156
Gene description
hydroxyproline O-arabinosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC114273156 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021026193.1 (167205..179859, complement)

NW_021026193.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114273159 Neighboring gene uncharacterized LOC114273154 Neighboring gene uncharacterized LOC114273160 Neighboring gene homeobox protein knotted-1-like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021026193 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021026193.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    167205..179859 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028214913.1 → XP_028070714.1  hydroxyproline O-arabinosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A7J7GG18
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases