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LOC114270653 probable galacturonosyltransferase-like 1 [ Camellia sinensis ]

Gene ID: 114270653, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114270653
Gene description
probable galacturonosyltransferase-like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114270653 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021026080.1 (3125760..3127328)

NW_021026080.1Genomic Context describing neighboring genes Neighboring gene probable inactive serine/threonine-protein kinase fnkC Neighboring gene ATP-citrate synthase alpha chain protein 2-like Neighboring gene calmodulin-binding transcription activator 2-like Neighboring gene 1-Cys peroxiredoxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021026080 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021026080.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    3125760..3127328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028212204.1 → XP_028068005.1  probable galacturonosyltransferase-like 1

    Conserved Domains (1) summary
    pfam01501
    Location:68 → 326
    Glyco_transf_8; Glycosyl transferase family 8
Nucleotide Protein
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