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LOC114261306 probable beta-1,4-xylosyltransferase IRX10L [ Camellia sinensis ]

Gene ID: 114261306, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114261306
Gene description
probable beta-1,4-xylosyltransferase IRX10L
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114261306 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021025627.1 (931843..942600, complement)

NW_021025627.1Genomic Context describing neighboring genes Neighboring gene chromophore lyase CRL, chloroplastic Neighboring gene uncharacterized LOC114261303 Neighboring gene uncharacterized LOC114261305 Neighboring gene uncharacterized LOC114261308 Neighboring gene ABC transporter B family member 9-like Neighboring gene uncharacterized LOC114261261

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021025627 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-beta-D-xylan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucuronoxylan glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucuronoxylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type secondary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,4-xylosyltransferase IRX10L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021025627.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    931843..942600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028201547.1 → XP_028057348.1  probable beta-1,4-xylosyltransferase IRX10L

    UniProtKB/TrEMBL
    A0A7J7FWJ8, A0A7J7HF69
    Conserved Domains (1) summary
    pfam03016
    Location:49 → 344
    Exostosin; Exostosin family
Nucleotide Protein
Heading Accession and Version

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