U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SELP selectin P [ Eumetopias jubatus (Steller sea lion) ]

Gene ID: 114223946, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SELP
Gene description
selectin P
See related
EnsemblRapid:ENSEJUG00000012835
Gene type
protein coding
RefSeq status
MODEL
Organism
Eumetopias jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SELP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998722.1 (6185204..6228532)

NW_020998722.1Genomic Context describing neighboring genes Neighboring gene selectin E Neighboring gene selectin L Neighboring gene PHD finger protein 11-like Neighboring gene coagulation factor V Neighboring gene solute carrier family 19 member 2 Neighboring gene coiled-coil domain containing 181

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020998722 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sialic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte tethering or rolling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to cytokine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
P-selectin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM402803v1 Primary Assembly

Genomic

  1. NW_020998722.1 Reference ASM402803v1 Primary Assembly

    Range
    6185204..6228532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028122968.1 → XP_027978769.1  P-selectin isoform X1

    Conserved Domains (3) summary
    cd00033
    Location:603 → 661
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:73 → 191
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:250 → 474
    PHA02927; secreted complement-binding protein; Provisional

  2. XM_028122970.1 → XP_027978771.1  P-selectin isoform X3

    Conserved Domains (3) summary
    cd00033
    Location:603 → 661
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:73 → 191
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:250 → 474
    PHA02927; secreted complement-binding protein; Provisional

  3. XM_028122969.1 → XP_027978770.1  P-selectin isoform X2

    Related
    ENSEJUP00000017498.1, ENSEJUT00000019575.1
    Conserved Domains (3) summary
    cd00033
    Location:603 → 661
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:73 → 191
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:250 → 474
    PHA02927; secreted complement-binding protein; Provisional

  4. XM_028122973.1 → XP_027978774.1  P-selectin isoform X6

    Related
    ENSEJUP00000017531.1, ENSEJUT00000019611.1
    Conserved Domains (3) summary
    cd00033
    Location:479 → 537
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:73 → 191
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:250 → 474
    PHA02927; secreted complement-binding protein; Provisional

  5. XM_028122978.1 → XP_027978779.1  P-selectin isoform X10

    Conserved Domains (3) summary
    cd03592
    Location:73 → 191
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:250 → 474
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:199 → 226
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  6. XM_028122972.1 → XP_027978773.1  P-selectin isoform X5

    Related
    ENSEJUP00000017518.1, ENSEJUT00000019596.1
    Conserved Domains (3) summary
    cd00033
    Location:674 → 732
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:73 → 191
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:250 → 474
    PHA02927; secreted complement-binding protein; Provisional

  7. XM_028122977.1 → XP_027978778.1  P-selectin isoform X9

    Related
    ENSEJUP00000017549.1, ENSEJUT00000019632.1
    Conserved Domains (4) summary
    cd00033
    Location:612 → 670
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:73 → 191
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:250 → 474
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:199 → 226
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  8. XM_028122974.1 → XP_027978775.1  P-selectin isoform X7

    Conserved Domains (3) summary
    cd00033
    Location:525 → 583
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:2 → 113
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:172 → 396
    PHA02927; secreted complement-binding protein; Provisional

  9. XM_028122971.1 → XP_027978772.1  P-selectin isoform X4

    Related
    ENSEJUP00000017590.1, ENSEJUT00000019678.1
    Conserved Domains (3) summary
    cd00033
    Location:572 → 630
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:42 → 160
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:219 → 443
    PHA02927; secreted complement-binding protein; Provisional

  10. XM_028122976.1 → XP_027978777.1  P-selectin isoform X8

    Conserved Domains (3) summary
    cd00033
    Location:510 → 568
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:42 → 160
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:219 → 443
    PHA02927; secreted complement-binding protein; Provisional

  11. XM_028122975.1 → XP_027978776.1  P-selectin isoform X7

    Conserved Domains (3) summary
    cd00033
    Location:525 → 583
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:2 → 113
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:172 → 396
    PHA02927; secreted complement-binding protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.