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A4GALT alpha 1,4-galactosyltransferase (P1PK blood group) [ Eumetopias jubatus (Steller sea lion) ]

Gene ID: 114218319, updated on 15-Mar-2024

Summary

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Gene symbol
A4GALT
Gene description
alpha 1,4-galactosyltransferase (P1PK blood group)
See related
EnsemblRapid:ENSEJUG00000013500
Gene type
protein coding
RefSeq status
MODEL
Organism
Eumetopias jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
Orthologs
human mouse all
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Genomic context

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See A4GALT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998681.1 (6430247..6454237)

NW_020998681.1Genomic Context describing neighboring genes Neighboring gene protein kinase C and casein kinase substrate in neurons 2 Neighboring gene ARF GTPase activating protein 3 Neighboring gene uncharacterized LOC114218327 Neighboring gene NADH-cytochrome b5 reductase 3 Neighboring gene uncharacterized LOC114218328

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020998681 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
alpha 1,4-galactosyltransferase (P blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM402803v1 Primary Assembly

Genomic

  1. NW_020998681.1 Reference ASM402803v1 Primary Assembly

    Range
    6430247..6454237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028115324.1 → XP_027971125.1  lactosylceramide 4-alpha-galactosyltransferase isoform X4

    Related
    ENSEJUP00000018246.1, ENSEJUT00000020406.1
    Conserved Domains (2) summary
    pfam04488
    Location:123 → 243
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:256 → 378
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  2. XM_028115326.1 → XP_027971127.1  lactosylceramide 4-alpha-galactosyltransferase isoform X4

    Conserved Domains (2) summary
    pfam04488
    Location:123 → 243
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:256 → 378
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  3. XM_028115319.1 → XP_027971120.1  lactosylceramide 4-alpha-galactosyltransferase isoform X1

    Conserved Domains (2) summary
    pfam04488
    Location:211 → 331
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:344 → 466
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  4. XM_028115320.1 → XP_027971121.1  lactosylceramide 4-alpha-galactosyltransferase isoform X2

    Conserved Domains (2) summary
    pfam04488
    Location:206 → 326
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:339 → 461
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  5. XM_028115327.1 → XP_027971128.1  lactosylceramide 4-alpha-galactosyltransferase isoform X5

    Conserved Domains (2) summary
    pfam04488
    Location:94 → 214
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:227 → 349
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  6. XM_028115322.1 → XP_027971123.1  lactosylceramide 4-alpha-galactosyltransferase isoform X4

    Conserved Domains (2) summary
    pfam04488
    Location:123 → 243
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:256 → 378
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  7. XM_028115321.1 → XP_027971122.1  lactosylceramide 4-alpha-galactosyltransferase isoform X3

    Conserved Domains (2) summary
    pfam04488
    Location:187 → 307
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:320 → 442
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  8. XM_028115325.1 → XP_027971126.1  lactosylceramide 4-alpha-galactosyltransferase isoform X4

    Conserved Domains (2) summary
    pfam04488
    Location:123 → 243
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:256 → 378
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  9. XM_028115328.1 → XP_027971129.1  lactosylceramide 4-alpha-galactosyltransferase isoform X5

    Conserved Domains (2) summary
    pfam04488
    Location:94 → 214
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:227 → 349
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
Nucleotide Protein
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