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CLEC5A C-type lectin domain containing 5A [ Eumetopias jubatus (Steller sea lion) ]

Gene ID: 114211787, updated on 15-Mar-2024

Summary

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Gene symbol
CLEC5A
Gene description
C-type lectin domain containing 5A
See related
EnsemblRapid:ENSEJUG00000009186
Gene type
protein coding
RefSeq status
MODEL
Organism
Eumetopias jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
Orthologs
human mouse all
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Genomic context

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See CLEC5A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998647.1 (6230140..6241236)

NW_020998647.1Genomic Context describing neighboring genes Neighboring gene maltase-glucoamylase, intestinal Neighboring gene taste 2 receptor member 38 Neighboring gene probable inactive serine protease 58 Neighboring gene serine protease 37 Neighboring gene taste 2 receptor member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020998647 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables virus receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 5 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM402803v1 Primary Assembly

Genomic

  1. NW_020998647.1 Reference ASM402803v1 Primary Assembly

    Range
    6230140..6241236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028106464.1 → XP_027962265.1  C-type lectin domain family 5 member A

    Related
    ENSEJUP00000012226.1, ENSEJUT00000013753.1
    Conserved Domains (1) summary
    cd03593
    Location:68 → 181
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

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