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VCAM1 vascular cell adhesion molecule 1 [ Eumetopias jubatus (Steller sea lion) ]

Gene ID: 114207980, updated on 15-Mar-2024

Summary

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Gene symbol
VCAM1
Gene description
vascular cell adhesion molecule 1
See related
EnsemblRapid:ENSEJUG00000002582
Gene type
protein coding
RefSeq status
MODEL
Organism
Eumetopias jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
Orthologs
human mouse all
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Genomic context

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See VCAM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998628.1 (5449691..5467297)

NW_020998628.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 88 Neighboring gene 40S ribosomal protein SA pseudogene Neighboring gene exostosin like glycosyltransferase 2 Neighboring gene solute carrier family 30 member 7 Neighboring gene receptor of activated protein C kinase 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020998628 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vascular cell adhesion protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM402803v1 Primary Assembly

Genomic

  1. NW_020998628.1 Reference ASM402803v1 Primary Assembly

    Range
    5449691..5467297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028102068.1 → XP_027957869.1  vascular cell adhesion protein 1

    Related
    ENSEJUP00000003387.1, ENSEJUT00000003844.1
    Conserved Domains (4) summary
    cd07689
    Location:400 → 498
    Ig_VCAM-1; Immunoglobulin (Ig)-like domain of vascular endothelial cell adhesion molecule-1 (VCAM-1, CD106) and intercellular cell adhesion molecule-1 (ICAM-1, CD54) and similar domains
    smart00408
    Location:234 → 294
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:317 → 394
    IG; Immunoglobulin
    pfam07679
    Location:22 → 108
    I-set; Immunoglobulin I-set domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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