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LOC11420737 arginase, mitochondrial-like [ Medicago truncatula (barrel medic) ]

Gene ID: 11420737, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11420737
Gene description
arginase, mitochondrial-like
Locus tag
MtrunA17_Chr4g0011501
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
Also known as
ARGAH; MtARGAH
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Genomic context

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See LOC11420737 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 4 NC_053045.1 (9001550..9011741, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 4 NC_016410.2 (8481835..8492009, complement)

Chromosome 4 - NC_053045.1Genomic Context describing neighboring genes Neighboring gene protein NRT1/ PTR FAMILY 7.3-like Neighboring gene arginase 1, mitochondrial Neighboring gene pectinesterase inhibitor 2 Neighboring gene uncharacterized LOC11431155

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables agmatinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in putrescine biosynthetic process from arginine, using agmatinase IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arginase, mitochondrial
Names
Agmatinase ARGAH
Arginase, mitochondrial
Arginine amidohydrolase
MtrunA17_Chr4g0011501
arginase family protein
putative arginase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053045.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    9001550..9011741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003605121.4 → XP_003605169.2  arginase, mitochondrial

    UniProtKB/Swiss-Prot
    A0A0C3WTP8, G7JFU5
    Conserved Domains (1) summary
    cl17011
    Location:1 → 338
    Arginase_HDAC; Arginase-like and histone-like hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
G7JFU5.2 GenPept UniProtKB/Swiss-Prot:G7JFU5

Gene LinkOut

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