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B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group) [ Eumetopias jubatus (Steller sea lion) ]

Gene ID: 114201174, updated on 15-Mar-2024

Summary

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Gene symbol
B4GALNT2
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)
See related
EnsemblRapid:ENSEJUG00000017628
Gene type
protein coding
RefSeq status
MODEL
Organism
Eumetopias jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
Orthologs
human mouse all
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Genomic context

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See B4GALNT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998844.1 (1077822..1116004, complement)

NW_020998844.1Genomic Context describing neighboring genes Neighboring gene G protein subunit gamma transducin 2 Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene U6 spliceosomal RNA Neighboring gene insulin like growth factor 2 mRNA binding protein 1 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020998844 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in UDP-N-acetylgalactosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in UDP-N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM402803v1 Primary Assembly

Genomic

  1. NW_020998844.1 Reference ASM402803v1 Primary Assembly

    Range
    1077822..1116004 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028093723.1 → XP_027949524.1  beta-1,4 N-acetylgalactosaminyltransferase 2

    Related
    ENSEJUP00000024134.1, ENSEJUT00000026848.1
    Conserved Domains (2) summary
    pfam16834
    Location:127 → 191
    CSM2; Shu complex component Csm2, DNA-binding
    pfam00535
    Location:390 → 481
    Glycos_transf_2; Glycosyl transferase family 2
Nucleotide Protein
Heading Accession and Version

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