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UMOD uromodulin [ Eumetopias jubatus (Steller sea lion) ]

Gene ID: 114199678, updated on 15-Mar-2024

Summary

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Gene symbol
UMOD
Gene description
uromodulin
See related
EnsemblRapid:ENSEJUG00000021534
Gene type
protein coding
RefSeq status
MODEL
Organism
Eumetopias jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
Orthologs
human mouse all
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Genomic context

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See UMOD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998801.1 (2154187..2167076, complement)

NW_020998801.1Genomic Context describing neighboring genes Neighboring gene calmodulin-A pseudogene Neighboring gene glycoprotein 2 Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene acyl-coenzyme A synthetase ACSM2A, mitochondrial-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020998801 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neutrophil migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uromodulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM402803v1 Primary Assembly

Genomic

  1. NW_020998801.1 Reference ASM402803v1 Primary Assembly

    Range
    2154187..2167076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028091677.1 → XP_027947478.1  uromodulin

    Related
    ENSEJUP00000029300.1, ENSEJUT00000032538.1
    Conserved Domains (3) summary
    smart00179
    Location:110 → 151
    EGF_CA; Calcium-binding EGF-like domain
    smart00241
    Location:336 → 585
    ZP; Zona pellucida (ZP) domain
    pfam12947
    Location:37 → 65
    EGF_3; EGF domain
Nucleotide Protein
Heading Accession and Version

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