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LOC114191652 callose synthase 9 [ Vigna unguiculata (cowpea) ]

Gene ID: 114191652, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114191652
Gene description
callose synthase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna unguiculata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC114191652 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
54
Annotation release Status Assembly Chr Location
100 current ASM411807v1 (GCF_004118075.1) 7 NC_040285.1 (40398950..40431686)

Chromosome 7 - NC_040285.1Genomic Context describing neighboring genes Neighboring gene callose synthase 3 Neighboring gene probable polyamine aminopropyl transferase Neighboring gene uncharacterized LOC114189574 Neighboring gene uncharacterized LOC114189652

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040285.1 Chromosome 7 Reference ASM411807v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vigna unguiculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM411807v1 Primary Assembly

Genomic

  1. NC_040285.1 Reference ASM411807v1 Primary Assembly

    Range
    40398950..40431686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028080957.1 → XP_027936758.1  callose synthase 9

    UniProtKB/TrEMBL
    A0A4D6N0S6
    Conserved Domains (2) summary
    pfam02364
    Location:1028 → 1767
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:337 → 448
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  2. XM_028080958.1 → XP_027936759.1  callose synthase 9

    UniProtKB/TrEMBL
    A0A4D6N0S6
    Conserved Domains (2) summary
    pfam02364
    Location:1028 → 1767
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:337 → 448
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

RNA

  1. XR_003605993.1 RNA Sequence

  2. XR_003605992.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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