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pfdn2 prefoldin subunit 2 [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114157297, updated on 15-Mar-2024

Summary

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Gene symbol
pfdn2
Gene description
prefoldin subunit 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See pfdn2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 14 NC_040241.1 (9030235..9032792, complement)

Chromosome 14 - NC_040241.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114157969 Neighboring gene beta-1,4-glucuronyltransferase 1 Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene nitrilase 1 Neighboring gene chloride channel 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040241.1 Chromosome 14 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of prefoldin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prefoldin subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040241.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    9030235..9032792 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028038172.1 → XP_027893973.1  prefoldin subunit 2

    UniProtKB/TrEMBL
    A0A3B5LIF7
    Conserved Domains (1) summary
    pfam01920
    Location:30 → 129
    Prefoldin_2; Prefoldin subunit
Nucleotide Protein
Heading Accession and Version

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