U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC114155443 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114155443, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC114155443
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC114155443 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 13 NC_040240.1 (17329058..17431171)

Chromosome 13 - NC_040240.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif, single stranded interacting protein Neighboring gene TGF-beta receptor type-2-like Neighboring gene oxysterol binding protein like 10 Neighboring gene transmembrane protein 42-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_040240.1 Chromosome 13 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040240.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    17329058..17431171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028035313.1 → XP_027891114.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    UniProtKB/TrEMBL
    A0A3B5MP71
    Conserved Domains (1) summary
    pfam02516
    Location:55 → 547
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases