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LOC114150298 torsin-1A-interacting protein 2-like [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114150298, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114150298
Gene description
torsin-1A-interacting protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC114150298 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 9 NC_040236.1 (15060508..15064484, complement)

Chromosome 9 - NC_040236.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 6 Neighboring gene olfactomedin-like 2Ba Neighboring gene torsin-1A-interacting protein 1-like Neighboring gene uncharacterized LOC114150311 Neighboring gene ferric-chelate reductase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040236.1 Chromosome 9 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040236.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    15060508..15064484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028026639.1 → XP_027882440.1  torsin-1A-interacting protein 2-like isoform X5

    Conserved Domains (2) summary
    TIGR03490
    Location:44 → 152
    Mycoplas_LppA; mycoides cluster lipoprotein, LppA/P72 family
    pfam05609
    Location:184 → 432
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_028026633.1 → XP_027882434.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:57 → 503
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_028026635.1 → XP_027882436.1  torsin-1A-interacting protein 2-like isoform X2

    Conserved Domains (1) summary
    pfam05609
    Location:53 → 499
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_028026640.1 → XP_027882441.1  torsin-1A-interacting protein 2-like isoform X6

    Conserved Domains (1) summary
    pfam05609
    Location:43 → 432
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  5. XM_028026636.1 → XP_027882437.1  torsin-1A-interacting protein 2-like isoform X3

    Conserved Domains (1) summary
    pfam05609
    Location:57 → 479
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  6. XM_028026637.1 → XP_027882438.1  torsin-1A-interacting protein 2-like isoform X4

    Conserved Domains (1) summary
    pfam05609
    Location:43 → 441
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  7. XM_028026638.1 → XP_027882439.1  torsin-1A-interacting protein 2-like isoform X5

    Conserved Domains (2) summary
    TIGR03490
    Location:44 → 152
    Mycoplas_LppA; mycoides cluster lipoprotein, LppA/P72 family
    pfam05609
    Location:184 → 432
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  8. XM_028026631.1 → XP_027882432.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:57 → 503
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  9. XM_028026634.1 → XP_027882435.1  torsin-1A-interacting protein 2-like isoform X2

    Conserved Domains (1) summary
    pfam05609
    Location:53 → 499
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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