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fut7 fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114150207, updated on 8-Aug-2024

Summary

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Gene symbol
fut7
Gene description
fucosyltransferase 7 (alpha (1,3) fucosyltransferase)
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See fut7 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 8 NC_040235.1 (9996416..10008082, complement)

Chromosome 8 - NC_040235.1Genomic Context describing neighboring genes Neighboring gene neural proliferation, differentiation and control, 1a Neighboring gene POU domain, class 5, transcription factor 3 Neighboring gene chloride intracellular channel 3 Neighboring gene patatin-like phospholipase domain containing 7a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040235.1 Chromosome 8 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040235.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    9996416..10008082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028026513.1 → XP_027882314.1  alpha-(1,3)-fucosyltransferase 7-like isoform X2

    Conserved Domains (2) summary
    pfam00852
    Location:168 → 338
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:40 → 149
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  2. XM_028026512.1 → XP_027882313.1  alpha-(1,3)-fucosyltransferase 7-like isoform X1

    Conserved Domains (2) summary
    pfam00852
    Location:186 → 356
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:56 → 167
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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