U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

lman2la lectin, mannose-binding 2-like a [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114150108, updated on 19-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
lman2la
Gene description
lectin, mannose-binding 2-like a
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
lman2l
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See lman2la in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 8 NC_040235.1 (16191625..16199443)

Chromosome 8 - NC_040235.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 13L Neighboring gene mitochondrial fission process 1 Neighboring gene ADP-ribosylation factor-like protein 3 Neighboring gene WW domain binding protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_040235.1 Chromosome 8 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
VIP36-like protein
Names
lectin, mannose binding 2 like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040235.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    16191625..16199443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028026325.1 → XP_027882126.1  VIP36-like protein isoform X1

    Conserved Domains (2) summary
    cl01312
    Location:323 → 362
    Sbt_1; Na+-dependent bicarbonate transporter superfamily
    cl14058
    Location:54 → 315
    lectin_L-type; legume lectins

  2. XM_028026326.1 → XP_027882127.1  VIP36-like protein isoform X2

    Conserved Domains (2) summary
    cl01312
    Location:312 → 351
    Sbt_1; Na+-dependent bicarbonate transporter superfamily
    cl14058
    Location:54 → 304
    lectin_L-type; legume lectins

  3. XM_028026327.1 → XP_027882128.1  VIP36-like protein isoform X3

    Conserved Domains (2) summary
    cl01312
    Location:245 → 284
    Sbt_1; Na+-dependent bicarbonate transporter superfamily
    cl14058
    Location:2 → 237
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.